[SYMBOL]
[A]
[B]
[C]
[D]
[E]
[F]
[G]
[H]
[I]
[J]
[K]
[L]
[M]
[N]
[O]
[P]
[Q]
[R]
[S]
[T]
[U]
[V]
[W]
[X]
[Y]
[Z]
Abstract Syntax Notation One
[See ASN.1] Accelrys package
accession number blastn and
FASTA files and
fastacmd parameter
2nd
formatdb parameter
megablast parameter
NCBI identifier
one-to-one mapping
public databases and
2nd
sequence records and
2nd
3rd
xdformat parameter
xdget parameter
actual length
2nd
adenine (A)
2nd
affine gaps blastall parameter
defined
megablast parameter
2nd
3rd
AG-BLAST
2nd
alanine (A)
algorithms
[See also two-hit algorithm][See also two-hit algorithm] alignment
2nd
3rd
big-O notation
BLAST
BLAT
HMMER
alias databases features
formatdb and
2nd
3rd
4th
GI numbers and
WU/NCBI-BLAST differences
alignment algorithms
2nd
3rd
alternate views
BLAST reporting
2nd
blastall parameter
blastpgp parameter
cross-species exploration
defined
determining significance
ESTs and
gaps and
insensitive search
mapping and
number expected by chance
overcalling and
percent identity and
query chopping and
repeats and
score metric
search space and
stop codons
2nd
3rd
sum score
TBLASTN
TBLASTX
vectors
alignment groups BLAST report
2nd
exons and
links and topcomboN
WU-BLAST
alignment threshold
2nd
Alignments option (report)
allele frequencies
alleles
2nd
Altivec
Altschul, Stephen
altscore parameter (WU-BLAST)
2nd
amino acid similarity
2nd
amino acids (aa) databases
difficulty sequencing
genetic code
PHI-BLAST and
proteins and
2nd
PSI-BLAST and
scoring matrices
symbols listed
annealing
annotating concatenating lines and
ESTs
2nd
Apple Computer
Archaea
arginine (R)
2nd
3rd
ASCII format
ASN.1 (Abstract Syntax Notation One) bl2seq parameter
format
2nd
formatdb parameter
reports and
asparagine (N)
2nd
aspartate (D)
2nd
asterisk (*)
2nd
ATG (start codon)
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