BLAST-BLAST

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N (unknown nucleotide)
N-terminus (protein)
N= parameter (WU-BLAST)
.nal extension
nat scores 2nd
National Center for Biotechnology Information [See NCBI]
National Institutes of Health
natural selection 2nd 3rd
NCBI (National Center for Biotechnology Information) 2nd 3rd 4th
NCBI Entrez
NCBI identifiers 2nd 3rd
NCBI-BLAST
    alignment 2nd 3rd 4th
    annotating ESTs
    bl2seq
    blastall
    blastclust 2nd
    BLASTP searches
    blastpgp
    BLASTX searches 2nd
    command-line syntax 2nd
    command-line tutorial
    converting 2nd
    cross-species exploration
    database sequence
    database splitting
    display formats
    expected HSP length
    fastacmd 2nd
    filters and
    formatdb
    frames
    genomic DNA/ESTs
    GI number
    implementation 2nd 3rd 4th 5th
    increasing processors
    insensitive search
    installation
    large databases
    mapping DNA/genomes 2nd
    mapping oligos/genomes
    mapping proteins/genomes
    massaging statistics
    megablast
    optimization
    origin of
    overview
    parameters and
    public domain
    query chopping
    report format
    scoring matrix names
    scoring schemes
    sensitive searches
    serial searching and
    statistical significance
    sum statistics
    TBLASTX searches 2nd
    transcript clustering
    usage statements
    vector clipping
    word size
    WU-BLAST differences
NCBI-BLASTN 2nd
NCBI-BLASTX 2nd
ncbi.cnf (OS 9)
ncbi.ini file (Windows)
.ncbirc file 2nd 3rd
ncRNA (noncoding RNA)
    complex repeats and
    genes and
    ribosomes and
    transcription and
near identity
    ESTs and
    mapping DNA/genomes 2nd 3rd
    TBLASTN search
    vector sequences
Needleman-Wunsch algorithm [See global alignment]
neighborhood 2nd 3rd
neighborhood word threshold score 2nd 3rd
neutral theory of evolution
nice command
nogap parameter (WU-BLAST)
non-sense mutation
noncoding RNA [See ncRNA]
noncoding sequence 2nd
nonnegok parameter (WU-BLAST)
normal distribution
normalized score
    alignments
    calculating for HSPs
    converting to
    defined
    Karlin-Altschul statistics and
nosegs parameter (WU-BLAST)
notes parameter (WU-BLAST)
novalidctxok parameter (WU-BLAST)
nr database 2nd
nrdb (WU-BLAST) 2nd 3rd 4th
nuclear DNA 2nd
nucleic acid sequences [See DNA RNA]
nucleic acids 2nd
Nucleic Acids Research article
nucleotide sequence
    blastall parameter
    blastclust
    BLASTN and
    BLASTX and
    display format
    nr database
    PCR and
    redundant
    segmenting
nucleotides (nt)
    ambiguity codes
    codons and 2nd
    databases 2nd
    DNA
    fastacmd parameter
    mutations and
    scoring schemes
    WU/NCBI-BLAST differences
nucleus (karya)
nwlen= parameter (WU-BLAST)
nwstart= parameter (WU-BLAST)